ABINIT, ground-state calculation variables:
List and description.
This document lists and provides the description of the name (keywords) of all files handling input variables to be used in the main input file of the abinis code.
The new user is advised to read first the new user's guide, before reading the present file. It will be easier to discover the present file with the help of the tutorial.
When the user is sufficiently familiarized with ABINIT, the reading of the ~abinit/doc/users/tuning file might be useful. For response-function calculations using abinis, please read the response function help file
Copyright (C) 1998-2009 ABINIT group (DCA, XG, RC)
This file is distributed under the terms of the GNU General Public License, see
~abinit/COPYING or
http://www.gnu.org/copyleft/gpl.txt .
For the initials of contributors, see ~abinit/doc/developers/contributors.txt .
Goto : ABINIT home Page | Suggested acknowledgments | List of input variables | Tutorial home page | Bibliography
Help files : New user's guide | Abinis (main) | Abinis (respfn) | Mrgddb | Anaddb | AIM (Bader) | Cut3D | Optic | Mrgscr
Files that describe other input variables:
- Basic variables, VARBAS
- Developper variables, VARDEV
- Files handling variables, VARFIL
- Geometry builder + symmetry related variables, VARGEO
- GW variables, VARGW
- Internal variables, VARINT
- Parallelisation variables, VARPAR
- Projector-Augmented Wave variables, VARPAW
- Response Function variables, VARRF
- Structure optimization variables, VARRLX
- Wannier90 interface variables, VARW90
Content of the file : alphabetical list of variables.
A. algalch
B. bdberry berryopt boxcenter boxcutmin
C. chkexit chkprim cpus, cpum, cpuh
D. diecut diegap dielam dielng diemac diemix diemixmag dosdeltae
E. efield enunit
F. fband fixmom
G.
H.
I. iatsph icoulomb iprcel iprctfvw ixcpositron
J. jellslab
K. kberry kptbounds kptrlatt kptrlen
L.
M. mixalch
N. natsph nberry nbdbuf ndivk ndism ngfft nline npsp %npspalch nqpt nspden nspinor ntypalch %ntyppure nwfshist
O. occ optdriver optstress
P. prtdensph positron
Q. qpt qptnrm
R. ratsph
S. slabwsrad slabzbeg slabzend so_psp spinat stmbias symafm
T. timopt tl_radius tl_nprccg tphysel tsmear
U.
V. vacuum vacwidth
W. wvl_crmult wvl_cpmult wvl_frmult wvl_fpmult wvl_nprccg
X. %xclevel
Y.
Z.
algalch
Mnemonics: ALGorithm for generating ALCHemical pseudopotentials
Characteristic:
Variable type: integer array algalch(ntypalch)
Default is 1 for all indices
Used for the generation of alchemical pseudopotentials, that is, when ntypalch is non-zero.
Give the algorithm to be used to generate the ntypalch alchemical potentials from the different npspalch pseudopotentials dedicated to this use.
Presently, algalch can only have the value 1, that is :
- the local potentials are mixed, thanks to the mixalch mixing coefficients
- the form factors of the non-local projectors are all preserved, and all considered to generate the alchemical potential
- the scalar coefficients of the non-local projectors are multiplied by the proportion of the corresponding type of atom that is present in mixalch
- the characteristic radius for the core charge is a linear combination of the characteristic radii of the core charges, build with the mixalch mixing coefficients
- the core charge function f(r/rc) is a linear combination of the core charge functions, build with the mixalch mixing coefficients
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bdberry
Mnemonics: BanD limits for BERRY phase
Characteristic:
Variable type: integer array bdberry(4)
Default is 4*0.
Used for non-zero values of berryopt.
Give the lower band and the upper band of the set of bands for which the Berry phase must be computed. Irrelevant if nberry is not positive. When nsppol is 1 (no spin-polarisation), only the two first numbers, giving the lower and highest bands, are significant. Their occupation number is assumed to be 2. When nsppol is 2 (spin-polarized calculation), the two first numbers give the lowest and highest bands for spin up, and the third and fourth numbers give the lowest and highest bands for spin down. Their occupation number is assumed to be 1 .
Presently, bdband MUST be initialized by the user
in case of Berry phase calculation: the above-mentioned
default will cause an early exit.
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berryopt
Mnemonics: BERRY phase options
Characteristic:
Variable type: integer berryopt
Default is 0
Specifies the use of Berry phase for the computation of either the Polarization, the derivatives with respect to the wavevector, or finite electric field calculations.
- 0 => no computation of expressions relying on a Berry phase (default)
- 1 => the computation of Berry phases is activated (berryphase routine)
- 2 => the computation of derivatives with respect to the wavevector, thanks to the Berry phase finite-difference formula, is activated (uderiv routine)
- 3 => same as option 1 and 2 together
- 4 => finite electric field calculation (Ground state as well as phonon)
- -1 => alternative computation of Berry phases (berryphase_new routine)
- -2 => alternative computation of derivatives with respect to the wavevector, thanks to the Berry phase finite-difference formula (berryphase_new routine)
- -3 => same as option -1 and -2 together
The other related input variables are :
- in case of berryopt=1,2, or 3 : bdberry and kberry; also, nberry must be larger than 0;
- in case of berryopt=-1,-2, or -3 : the variable rfdir must be used to specify the primitive vector along which the projection of the polarization or the ddk will be computed. For example if berryopt=1 and rfdir=1 0 0, the projection of the polarization along the reciprocal lattice vector G_1 is computed. In case rfdir=1 1 1, ABINIT computes the projection of P along G_1, G_2 and G_3 and transforms the results to cartesian coordinates;
- efield, rfdir in case of berryopt=4 ;
The cases berryopt=-1,-2,-3 and 4 have to be used with nsppol=1, nspinor=1, and occopt=1.
For a phonon calculation under a finite electric field, respect the following procedure.
- 1. Run a scf ground-state calculation at zero electric field to get wavefunctions to initialize the ground-state calculation in finite electric fields.
- 2. Run a scf ground-state calculation in finite electric field. The electric field is controlled by the input variable efield. berryopt should be 4. The input variable kptopt should be set to be 2.
- 3. Based on the wave functions obtained in step (2), perform phonon calculation by setting berryopt=4, kptopt=3 and The same value of efield than in step 2. nsym should be set to 1 currently but this restriction may be removed later . The other parameters are the same as phonon calculation at zero electric field.
- Note : the choice of k-point sampling N x N x N should be the same in the three runs and N should be an even number.
At present, note that berryopt=4 is not compatible with non-zero optcell.
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boxcenter
Mnemonics: BOX CENTER
Characteristic:
Variable type: real array boxcenter(3)
Default is 0.5 0.5 0.5 .
Defines the center of the box, in reduced coordinates. At present, this information is only used in the case of Time-Dependent DFT computation of the oscillator strength. One must take boxcenter such as to be roughly the center of the cluster or molecule. The default is sensible when the vacuum surrounding the cluster or molecule has xred 0 or 1. On the contrary, when the cluster or molecule is close to the origin, it is better to take boxcenter=(0 0 0).
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boxcutmin
Mnemonics: BOX CUT-off MINimum
Characteristic:
Variable type: real
Default is 2.0 .
The box cut-off ratio is the ratio between the wavefunction plane wave sphere radius, and the radius of the sphere that can be inserted in the FFT box, in reciprocal space. In order for the density to be exact (in the case of plane wave, not PAW), this ratio should be at least two. If one uses a smaller ratio, one will gain speed, at the expense of accuracy. In case of pure ground state calculation (e.g. for the determination of geometries), this is sensible. However, the wavefunctions that are obtained CANNOT be used for starting response function calculation.
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charge
Mnemonics: CHARGE
Characteristic:
Variable type: real number
Default is 0.
Used to establish charge balance between the number of electrons filling the bands and the nominal charge associated with the atomic cores.
The code adds up the number of valence electrons provided by the pseudopotentials of each type (call this "zval"), then add charge, to get the number of electrons per unit cell, nelect.
Then, if iscf is positive, the code adds up the band occupancies (given in array occ) for all bands at each k point, then multiplies by the k point weight wtk at each k point. Call this sum "nelect_occ" (for the number of electrons from occupation numbers). It is then required that:
nelect_occ = nelect
To treat a neutral system, which is desired in nearly all cases, one must use charge=0. To treat a system missing one electron per unit cell, set charge=+1.
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chkexit
Mnemonics: CHecK whether the user want to EXIT
Characteristic:
Variable type: integer parameter
Default is 0 (before v5.3, it was 2 for sequential version of ABINIT, 1 for parallel version of ABINIT.)
If chkexit is 1 or 2, ABINIT will check whether the user wants to interrupt the run (using the keyword "exit" on the top of the input file or creating a file named "abinit.exit": see the end of section 3.2 of abinis_help).
If chkexit=0, the check is not performed at all
If chkexit=1, the check is not performed frequently (after each SCF step)
If chkexit=2, the check is performed frequently (after a few bands, at each k point)
In all cases, the check is performed at most every 2 seconds of CPU time.
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chkprim
Mnemonics: CHecK whether the cell is PRIMitive
Characteristic: SYMMETRY FINDER
Variable type: integer parameter
Default is 1.
If the symmetry finder is used (see nsym), a non-zero value of chkprim will make the code stop if a non-primitive cell is used. If chkprim=0, a warning is issued, but the run does not stop.
If you are generating the atomic and cell geometry using
spgroup, you might
generate a PRIMITIVE cell using
brvltt=-1 .
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cpus, cpum, cpuh
Mnemonics: CPU time limit in: Seconds, Minutes, Hours
Characteristic: NO MULTI ; for cpum and cpuh : NO INTERNAL
Variable type: real parameters
Default is 0.0d0.
One of these three real parameters can be defined in the input file, to set up a CPU time limit. When the job reaches that limit, it will try to end smoothly. However, note that this might still take some time. If the user want a firm CPU time limit, the present parameter must be reduced sufficiently. Intuition about the actual margin to be taken into account should come with experience ...
Note that only one of these three parameters can be defined in a single input file. A zero value has no action of the job.
Internally, only cpus is used in the dtset array: adequate conversion factors are used to generate it from cpum or cpuh.
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diecut
Mnemonics: DIElectric matrix Energy CUToff
Characteristic: ENERGY
Variable type: real parameter
Default is 2.2d0 Ha.
Kinetic energy cutoff that controls the number of planewaves used to represent the dielectric matrix:
(1/2)[(2 Pi)*(Gmax)]^{2}=ecut for Gmax.
Can be specified in Ha (the default), Ry, eV or Kelvin, since ecut has the 'ENERGY' characteristics. (1 Ha=27.2113845 eV)
All planewaves inside this "basis sphere" centered at G=0 are included in the basis. This is useful only when iprcel>=21, which means that a preconditioning scheme based on the dielectric matrix is used.
NOTE : a negative diecut will define the same dielectric basis sphere as the corresponding positive value, but the FFT grid will be identical to the one used for the wavefunctions. The much smaller FFT grid, used when diecut is positive, gives exactly the same results.
No meaning for RF calculations yet.
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diegap
Mnemonics: DIElectric matrix GAP
Characteristic: ENERGY
Variable type: real parameter
Default is 0.1 Ha.
Gives a rough estimation of the dielectric gap between the highest energy level computed in the run, and the set of bands not represented. Used to extrapolate dielectric matrix when iprcel >= 21.
Can be specified in Ha (the default), Ry, eV or Kelvin, since ecut has the 'ENERGY' characteristics. (1 Ha=27.2113845 eV)
No meaning for RF calculations yet.
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dielam
Mnemonics: DIElectric matrix LAMbda
Characteristic:
Variable type: real parameter between 0 and 1
Default is 0.5 .
Gives the amount of occupied states with mean energy given by the highest level computed in the run, included in the extrapolation of the dielectric matrix. Used when iprcel >= 21.
No meaning for RF calculations yet.
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dielng
Mnemonics: model DIElectric screening LeNGth
Characteristic:
Variable type: real parameter
Default is 1.0774841d0 (Bohr), for historical reasons.
Used for screening length (in Bohr) of the model dielectric function, diagonal in reciprocal space. By default, given in Bohr atomic units (1 Bohr=0.5291772108 Angstrom), although Angstrom can be specified, if preferred, since dielng has the 'LENGTH' characteristics.
This model dielectric function is as follows :
( 1 + dielng^{2} * K^{2} ) diel(K)= -------------------------------------------- ( 1/diemac + dielng^{2} * K^{2} ) * diemixThe inverse of this model dielectric function will be applied to the residual, to give the preconditioned change of potential. Right at K=0, diel(K) is imposed to be 1.
If the preconditioning were perfect,
the change of potential would lead to an exceedingly fast solution
of the self-consistency problem (two or three steps).
The present model dielectric function is excellent for
rather homogeneous unit cells.
When K->0 , it tends to the macroscopic dielectric
constant, eventually divided by the mixing factor diemix
(or diemixmag for magnetization).
For metals, simply put diemac to a very large value (10^6 is OK)
The screening length dielng governs the length scale
to go from the macroscopic regime to the microscopic
regime, where it is known that the dielectric function
should tend to 1. It is on the order of 1 Bohr for
metals with medium density of states at the Fermi level,
like Molybdenum, and for Silicon. For metals with a
larger DOS at the Fermi level (like Iron),
the screening will be more effective, so that dielng
has to be decreased by a factor of 2-4.
This works for GS and RF calculations.
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diemac
Mnemonics: model DIElectric MACroscopic constant
Characteristic:
Variable type: real parameter
Default is 10^{6} (metallic damping).
A rough knowledge of the macroscopic dielectric constant diemac of the system is a useful help to speed-up the SCF procedure: a model dielectric function, see the keyword dielng, is used for that purpose. It is especially useful for speeding up the treatment of rather homogeneous unit cells.
Some hint :
The value of diemac should usually be bigger than 1.0d0,
on physical grounds.
For metals, simply put diemac to a very large value (the default 10^{6} is OK)
For silicon, use 12.0 . A similar value is likely to work well for
other semiconductors
For wider gap insulators, use 2.0 ... 4.0
For molecules in an otherwise empty big box, try 1.5 ... 3.0
Systems that combine a highly polarisable part and some vacuum are rather
badly treated by the model dielectric function. One has to use the
"extrapolar" technique, activated by the input variable
iprcel.
In sufficiently homogeneous systems, you might have to experiment
a bit to find the best diemac. If you let diemac
to its default value, you might even never obtain the self-consistent convergence !
For response function calculations, use the same
values as for GS. The improvement in speed can be considerable
for small (but non-zero) values of the wavevector.
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diemix
Mnemonics: model DIElectric MIXing factor
Characteristic:
Variable type: real parameter
Default is 1.0 (norm-conserving psps or iprcel/=0) or 0.7 (PAW and iprcel=0).
Gives overall factor of the preconditioned residual density/potential to be transferred in the SCF cycle.
It should be between 0.0 and 1.0 .
If the model dielectric function were perfect, diemix should be 1.0 . By contrast, if the model dielectric function does nothing (when diemac=1.0d0 or dielng is larger than the size of the cell), diemix can be used to damp the amplifying factor inherent to the SCF loop.
For molecules, a value on the order 0.5 or 0.33 is rather usual.
When mod(iscf,10)=3, 4 ,7 or 5, diemix is only important at the few first iterations when anharmonic effects are important, since these schemes compute their own mixing factor for self-consistency.
Also note that a different value of diemix can be used for the magnetization (see diemixmag).
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diemixmag
Mnemonics: model DIElectric MIXing factor for the MAGgnetization
Characteristic:
Variable type: real parameter
Default is diemixmag= diemix when iprcel=0 or 70<iprcel<80 or iscf<10 (SCF mixing on potential), else diemixmag= - diemix
Gives overall factor of the preconditioned residual magnetization/magnetic field to be transferred in the SCF cycle (see diemix for further information).
For the time being, apply only when the SCF mixing is done on the density (iscf>=10).
A negative value of diemixmag means that magnetization is only preconditionned by ABS(diemixmag), without the use of any preconditionner.
When SCF cycle has some difficulties to converge, changing the value of diemixmag can have a positive effect.
In particular diemixmag=-4 is a good choice (i.e. diemixmag=4, no other preconditionner on magnetization).
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dosdeltae
Mnemonics: DOS Delta in Energy
Characteristic: ENERGY
Variable type: real parameter
Default is 0.0 .
Defines the linear grid resolution (energy increment) to be used for the computation of the Density-Of-States, when prtdos is non-zero.
If dosdeltae is set to zero (the default value), the actual increment is 0.001 Ha if prtdos=1, and the much smaller value 0.00005 Ha if prtdos=2. This different default value arises because the prtdos=1 case, based on a smearing technique, gives a quite smooth DOS, while the DOS from the tetrahedron method, prtdos=2, is rapidly varying.
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efield
Mnemonics: Electric FIELD
Characteristic:
Variable type: real array efield(3)
Default is 3*0.0 .
In case berryopt=4, a finite electric field calculation is performed. The value of this electric field, and its direction is determined by efield. It must be given in atomic units (1 a.u. of electric field= 514220624373.482 V/m, see note below), in cartesian coordinates.
References for the calculation under electric field (based on multi k point Berry phase) :
- Nunes and Vanderbilt, PRL 73, 712 (1994) : real-space version of the finite-field Hamiltonian
- Nunes and Gonze, PRB 63, 155107 (2001) : reciprocal-space version of the finite-field Hamiltonian (the one presently implemented), and extensive theoretical analysis
- Souza, Iniguez and Vanderbilt, PRL 89, 117602 (2003) : implementation of the finite-field Hamiltonian (reciprocal-space version)
The atomic unit of electric field strength is :
e_Cb/(4 pi eps0 a0**2), where e_Cb is the electronic charge in Coulomb (1.60217653e-19),
eps0 is the electric constant (8.854187817d-12 F/m), and a0 is the Bohr radius
in meter (0.5291772108e-10).
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enunit
Mnemonics: ENergy UNITs
Characteristic:
Variable type: integer parameter
Default is 0 (eigenvalues in hartree and phonon frequencies in hartree and cm-1).
Governs the units to be used for output of eigenvalues (and eventual phonon frequencies)
- 0=>print eigenvalues in hartree;
- 1=>print eigenvalues in eV;
- 2=>print eigenvalues in both hartree and eV.
- 0=> phonon frequencies in Hartree and cm-1;
- 1=> phonon frequencies in eV and THz;
- 2=> phonon frequencies in hartree, eV, cm-1, Thz and Kelvin.
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fband
Mnemonics: Factor for the number of BANDs
Characteristic: NO INTERNAL
Variable type: real parameter, positive or zero
Default is 0.125 in case occopt==1 (insulating case), 0.500 for other values of occopt (metallic case) and 0. in wavelet case. Not used in case occopt==0 or 2.
Governs the number of bands to be used in the code in the case the parameter nband is not defined in the input file (which means that occopt is not equal to 0 or 2).
In case fband is 0.0d0, the code computes from
the pseudopotential files and the geometry data
contained in the input file, the number of electrons
present in the system. Then, it computes the minimum
number of bands that can accomodate them, and use
that value for nband.
In case fband differs from
zero, other bands will be added, just
larger than fband times the number of atoms.
This parameter is not echoed in the top of the main
output file, but only the parameter nband that it allowed
to compute. It is also not present in the dtset array (no internal).
The default values are chosen such as to give naturally some
conduction bands. This improves the robustness of the code,
since this allows to identify lack of convergence coming from
(near-)degeneracies at the Fermi level. In the metallic
case, the number of bands generated might be too small
if the smearing factor is large. The occupation numbers
of the higher bands should be small enough such as to
neglect higher bands. It is difficult to automate
this, so a fixed default value has been chosen.
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fixmom
Mnemonics: FIX the magnetic MOMent
Characteristic:
Variable type: real parameter
Default is -99.99d0
This input variable is active only in the nsppol=2 case. If fixmom is not the "magic" value of -99.99d0, the magnetic moment of the system will be fixed to the value of fixmom. Otherwise, the magnetic moment will be determined self-consistently, by having the same spin up and spin down Fermi energy.
Note : for the time being, only the spin down Fermi energy
is written out in the main output file. In the fixed
magnetic moment case, it differs from the
spin up Fermi energy.
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iatsph
Mnemonics: Index for the ATomic SPHeres of the atom-projected density-of-states
Characteristic:
Variable type: integer array iatsph(1:natsph)
Default is 1, 2, ... natsph
This input variable is active only in the prtdos=3 case or if pawfatbnd=1 or 2.
It gives the number of the natsph atoms around which the sphere for atom-projected density-of-states will be build, in the prtdos=3 case. The radius of these spheres is given by ratsph.
If pawfatbnd=1 or 2, it gives the number of the natsph atoms around which atom-projected band structure will be built.
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icoulomb
Mnemonics: Coulomb TReaTMenT
Characteristic:
Variable type: integer
Default is 0
Defines the type of computation used for Hartree potential, local part of pseudo-potential and ion-ion interaction:
- icoulomb=0 : usual reciprocal space computation, using 1 / g^2 for the Hartree potential and using Ewald correction.
- icoulomb=1 : free boundary conditions are used when the Hartree potential is computed, real space expressions of pseudo-potentials are involved (restricted to GTH pseudo-potentials) and simple coulombian interaction gives the ion-ion energy.
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iprcel
Mnemonics: Integer for PReConditioning of ELectron response
Characteristic:
Variable type: integer parameter
Default is 0.
Used when iscf>0, to define the SCF preconditioning scheme. Potential-based preconditioning schemes for the SCF loop (electronic part) are still a subject of active research. The present parameter (electronic part) describes the way the change of potential is derived from the residual.
The possible values of iprcel correspond to :
- 0 => model dielectric function described by diemac, dielng and diemix.
- larger or equal to 21 => will compute the dielectric matrix according to diecut, dielam, diegap. This methodology is described in P.-M. Anglade, X. Gonze, Phys. Rev. B 78, 045126 (2008).
- Between 21 and 29 => for the first few steps uses the same as option 0 then compute RPA dielectric function, and use it as such.
- Between 31 and 39 => for the first few steps uses the same as option 0 then compute RPA dielectric function, and use it, with the mixing factor diemix.
- Between 41 and 49 => compute the RPA dielectric matrix at the first step, and recompute it at a later step, and take into account the mixing factor diemix.
- Between 51 and 59 => same as between 41 and 49, but compute the RPA dielectric matrix by another mean
- Between 61 and 69 => same as between 41 and 49, but compute the electronic dielectric matrix instead of the RPA one.
- Between 71 and 78 => STILL UNDER DEVELOPMENT -- NOT USABLE ; Use the modified Kerker preconditioner with a real-space formulation (basic formulation is shown at dielng). The dielectric matrix is approximated thanks to diemac and dielng. Note that diemix is also used.
- 79 => STILL UNDER DEVELOPMENT -- NOT USABLE ; same as previous but with an alternate algorithm.
- 141 to 169 => same as Between 41 and 69 (but, the dielectric matrix is also recomputed every iprcel modulo 10 step).
The computation of the dielectric matrix (for 0 [100]< iprcel < 70 [100]) is based on the extrapolar approximation. This approximation can be tuned with diecut, dielam, and diegap. Yet its accuracy mainly depends on the number of conduction bands included in the system. Having 2 to 10 empty bands in the calculation is usually enough (use nband).
NOTES:
- The step at which the dielectric matrix is computed or recomputed is determined by modulo(iprcel,10). The recomputation happens just once in the calculation for iprcel < 100.
- For non-homogeneous relatively large cells iprcel=45 will likely give a large improvement over iprcel=0.
- For extremely large inhomogeneous cells where computation of the full dielectric matrix takes too many weeks, 70 < iprcel < 80 is advised.
- For nsppol=2 or nspinor=2 with metallic occopt, only mod(iprcel,100)<50 is allowed.
- No meaning for RF calculations yet.
- The exchange term in the full dielectric matrix diverges for vanishing densities. Therefore the values of iprcel beyond 60 must not be used for cells containing vacuum, unless ones computes this matrix for every step (iprcel=161).
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iprctfvw
Mnemonics: Integer for PReConditioning (of electron response) based on Thomas - Fermi - von Weizsäcker approximations of the kinetic energy
Characteristic:
Variable type: integer parameter
Default is 0.
Used when iscf>0, to use the TFvW preconditioner. This is still in an early DEVELOPMENT stage and is not usable as is.
- 0 => not TFvW preconditioning applied ;
- 1 => TFvW prc. is applied on the residuals left by other preconditioners ;
- 2 => Same as previously but with a linear response formulation of TFvW ;
- 3 => (starting at abinit 5.3.?) TFvW prc. is applied before any other preconditioner.
For nsppol >= 2 only iprcel=0 is allowed.
No meaning for RF calculations yet.
Compatible only with potential mixing : iscf<10.
References:
- D. Raczkowski, A Canning and L.W. Wang PRB 64 121101 (2001)
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ixcpositron
Mnemonics: eXchange-Correlation for the electron-POSITRON interaction
Characteristic:
Variable type: integer
Default is 0
Define the type of electron-positron correlation that is used in case of a positron calculation (with non-zero value of positron).
- ixcpositron=1 : Boronski and Nieminen parameterization of Arponen and Pajanne electron-positron gas energy data
- ixcpositron=2 : Puska, Seitsonen and Nieminen parameterization of Arponen and Pajanne electron-positron gas energy data
References:
- J. Arponen and E. Pajanne, Ann. Phys. (N.Y.) 121, 343 (1979).
- E. Boronski and R.M. Nieminen, Phys. Rev. B 34, 3820 (1986).
- M.J. Puska, A.P. Seitsonen, and R.M. Nieminen, Phys. Rev. B 52, 10947 (1994).
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jellslab
Mnemonics: include a JELLium SLAB in the cell
Characteristic:
Variable type: integer parameter
Default is 0 (no jellium slab).
If set to 1, a slab of uniform positive background charge density, that is, a jellium slab, is included in the calculation cell. A portion of the unit cell is filled with such positive charge density distribution which is equal to a bulk-mean value n_{bulk} between two edges and zero in the vacuum region if present.
For the sake of convenience the unit cell is supposed to have the third crystal primitive lattice vector orthogonal to the other ones so that the portion of the cell filled by the jellium slab can be defined through its edges along z.
The bulk-mean positive charge density is fixed by the input variable slabwsrad, while the position of the slab edges along z is defined through the input variables slabzbeg and slabzend.
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kberry
Mnemonics: K wavevectors for BERRY phase computation
Characteristic:
Variable type: integer array kberry(3,nberry)
Default is an array of 0
Used for non-zero values of berryopt.
This array defines, for each Berry phase calculation (the number of such calculations is defined by nberry), the difference of wavevector between k points for which the overlap matrix must be computed. The polarisation vector will be projected on the direction of that wavevector, and the result of the computation will be the magnitude of this projection. Doing more than one wavevector, with different independent direction, allows to find the full polarisation vector. However, note that converged results need oriented grids, denser along the difference wavevector than usual Monkhorst-Pack grids.
The difference of wavevector is computed in the coordinate
system defined by the k-points grid
(see ngkpt
and kptrlatt), so that
the values of kberry are integers.
Of course, such a k point grid must exist, and all the
corresponding wavefunctions must be available, so that the
computation is allowed only when kptopt
is equal to 3. In order to save computing time, it is suggested
to make a preliminary calculation of the wavefunctions on the
irreducible part of the grid, with kptopt
equal to 1, and then use these converged wavefunctions
in the entire Brillouin zone, by reading them to initialize
the kptopt=3 computation.
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kptbounds
Mnemonics: K PoinTs BOUNDarieS
Characteristic: NOT INTERNAL
Variable type: real array kptbounds(3,abs(kptopt)+1)
Default is No Default
It is used to generate the circuit to be followed by the band structure, when kptopt is negative (it is not read if kptopt is zero or positive).
There are abs(kptopt) segments to be defined, each of which wich start from the end point of the preceeding one. Thus, the number of points to be input is abs(kptopt)+1. They form a circuit starting at kptbounds(1:3,1)/kptnrm and ending at kptbounds(1:3,abs(kptopt)+1)/kptnrm. The number of divisions of each segment can be defined either using the array ndivk or the variable ndivsm that just defines the number of divisions for the smallest segment
As for kpt, kptbounds is specified using the primitive vectors in reciprocal space. If your Bravais lattice is simple, then it should be quite easy to find the coordinates of the end points of the end points. On the other hand, for centered, body-centered, face-centered, hexagonal, and rhombohedral Bravais lattice, the conversion might be more difficult. See the description of kpt for an explanation of how to convert data from the "conventional" cartesian coordinates to the primitive vectors in the reciprocal space. In order to help a bit, we list below a series of typical values, for the FCC, BCC, hexagonal and rhombohedral Bravais lattices. Note : all the data below are given in dimensionless units ; they have to be rescaled by the actual lengths defined by the acell values. However, kptbounds values can be used as such, if the values of rprim given below are adopted.
A. FCC lattice
Suppose the primitive vectors in real space are given by
rprim 0 1 1 1 0 1 1 1 0or
rprim 0 1/2 1/2 1/2 0 1/2 1/2 1/2 0(these two possibilities only differ by a scaling factor, irrelevant for the definition of the k points in the primitive vectors in reciprocal space). Then, the reciprocal primitive vectors (in conventional cartesian coordinates) are
(-1/2 1/2 1/2), (1/2 -1/2 1/2), (1/2 1/2 -1/2)or
(-1/2 1/2 1/2), (1/2 -1/2 1/2), (1/2 1/2 -1/2)and, in both cases, the coordinates of several special points with respect to primitive vectors in reciprocal space are
X (0 1/2 1/2) (conventional cartesian coordinate 1/2 0 0) X'(1/2 1/2 1 ) (conventional cartesian coordinate 1/2 1/2 0) (an other instance of X, in another Brillouin zone) L (1/2 0 0 ) (conventional cartesian coordinate 1/4 1/4 1/4) W (1/4 1/2 3/4) (conventional cartesian coordinate 1/2 1/4 0) U (1/4 5/8 5/8) (conventional cartesian coordinate 1/2 1/8 1/8) K (3/8 3/8 3/4) (conventional cartesian coordinate 3/8 3/8 0)Note that K is actually equivalent to U, by spatial and translational symmetry. So, if you want to specify a typical circuit, the following might do the work : L-Gamma-X-W-K,U-L-W-X-K,U-Gamma with
kptbounds 1/2 0 0 0 0 0 0 1/2 1/2 1/4 1/2 3/4 3/8 3/8 3/4 1/2 0 0 1/4 1/2 3/4 1/2 1/2 1 3/8 3/8 3/4 0 0 0
The lengths of segments (this information is useful to draw the band structure, with the correct relative scale between special points) can be found using the conventional cartesian coordinates : l(L-Gamma)=sqrt(3)/4=0.433... ; l(Gamma-X)=1/2=0.5 ; l(X-W)=1/4=0.25 ; l(W-K)=sqrt(2)/8=0.177... ; l(K-L)=sqrt(6)/8=0.306... ; l(L-W)=sqrt(2)/4=0.354... ; l(W-X)=1/4=0.25 ; l(X-K)=sqrt(2)/8=0.177... ; l(K-Gamma)=sqrt(2).3/8=0.530...
B. BCC lattice
Suppose the primitive vectors in real space are given by
rprim -1 1 1 1 -1 1 1 1 -1(as for the FCC lattice, there is a scale invariance). Then, the reciprocal primitive vectors (in conventional cartesian coordinates) are (0 1/2 1/2), (1/2 0 1/2), and (1/2 1/2 0) and the coordinates of several special points with respect to primitive vectors in reciprocal space are
H (-1/2 1/2 1/2) (conventional cartesian coordinate 1/2 0 0) N ( 0 0 1/2) (conventional cartesian coordinate 1/4 1/4 0) P ( 1/4 1/4 1/4) (conventional cartesian coordinate 1/4 1/4 1/4)So, if you want to specify a typical circuit, the following might do the work : Gamma-H-N-Gamma-P-N-P-H
kptbounds 0 0 0 -1/2 1/2 1/2 0 0 1/2 0 0 0 1/4 1/4 1/4 0 0 1/2 1/4 1/4 1/4 -1/2 1/2 1/2
The lengths of segments (this information is useful to draw the band structure, with the correct relative scale between special points) can be found using the conventional cartesian coordinates : l(Gamma-H)=1/2=0.5 ; l(H-N)=sqrt(2)/4=0.354... ; l(N-Gamma)=sqrt(2)/4=0.354... ; l(Gamma-P)=sqrt(3)/4=0.433... ; l(P-N)=1/4=0.25 ; l(N-P)=1/4=0.25 ; l(P-H)=sqrt(3)/4=0.433...
C. Hexagonal lattices
Suppose the primitive vectors in real space are given by
rprim 1 0 0 -1/2 sqrt(0.75) 0 0 0 1The coordinates of several special points with respect to primitive vectors in reciprocal space are
M (1/2 0 0) or (0 1/2 0) or (-1/2 1/2 0) L (1/2 0 1/2) or (0 1/2 1/2) or (-1/2 1/2 1/2) K (1/3 1/3 0) or (2/3 -1/3 0) or (-1/3 2/3 0) H (1/3 1/3 1/2) or (2/3 -1/3 1/2) or (-1/3 2/3 1/2) A (0 0 1/2)So, if you want to specify a typical circuit, the following might do the work : K-Gamma-M-K-H-A-L-H-L-M-Gamma-A
kptbounds 1/3 1/3 0 0 0 0 1/2 0 0 1/3 1/3 0 1/3 1/3 1/2 0 0 1/2 1/2 0 1/2 1/3 1/3 1/2 1/2 0 1/2 1/2 0 0 0 0 0 0 0 1/2
In order to find the lengths of segments (this information is useful to draw the band structure, with the correct relative scale between special points) one needs to know the a and c lattice parameters. Also, in what follows, we omit the 2*pi factor sometimes present in the definition of the reciprocal space vectors. The reciprocal vectors are (1/a 1/(sqrt(3)*a) 0) , (0 2/(sqrt(3)*a) 0), (0 0 1/c). The lengths of the above-mentioned segments can be computed as : l(K-Gamma)=2/(3*a)=0.666.../a ; l(Gamma-M)=1/(sqrt(3)*a)=0.577.../a ; l(M-K)=1/(3*a)=0.333.../a ; l(K-H)=1/(2*c)=0.5.../c ; l(H-A)=2/(3*a)=0.666.../a ; l(A-L)=1/(sqrt(3)*a)=0.577.../a ; l(L-H)=1/(3*a)=0.333.../a ; l(H-L)=1/(3*a)=0.333.../a ; l(L-M)=1/(2*c)=0.5.../c ; l(M-Gamma)=-1/(sqrt(3)*a)=0.577.../a ; l(Gamma-A)=1/(2*c)=0.5.../c
D. Rhombohedral lattices
Rhombohedral lattices are characterised by two parameters, the length of the primitive vectors, that we will denote a0, and the angle they form, alpha. These can be directly input of ABINIT, as acell and angdeg
This will generate the primitive vectors in real space , with
acell a0 a0 a0 and rprim a 0 c -a/2 a*sqrt(0.75) c -a/2 -a*sqrt(0.75) cwith a^2+c^2=1, a^2=(1-cos(alpha))*2/3, c^2=(1+2*cos(alpha))*1/3, (a/c)^2=2*(1-cos(alpha))/(1+2*cos(alpha)) and also cos(alpha)=(1-(a/c)^2/2)/(1+(a/c)^2). Alternatively, these values of rprim might directly be the input of ABINIT (then, the balance of the scaling factor might be adjusted between acell and rprim).
Unlike for the simple cubic, FCC, BCC, hexagonal (and some other) Bravais lattice, the topology of the Brillouin zone will depend on the alpha (or a/c) value. We give below information concerning the case when cos(alpha) is positive, that is, (a/c)^2 lower than 2.
The coordinates of several special points with respect to primitive vectors in reciprocal space will not depend on the a/c ratio, but some others will depend on it. So, some care has to be exercised. Notations for the Brillouin Zone special points are the same as in Phys. Rev. B 41, 11827 (1990).
L (1/2 0 0) or (0 1/2 0) or (0 0 1/2) (or with negative signs) T (1/2 1/2 1/2) X (1/2 1/2 0) or (1/2 0 1/2) or (0 1/2 1/2) (or with separate negative signs) W (5/6 - (a/c)^2/6 , 1/2 , 1/6 + (a/c)^2/6 ) = (1 0 -1)*(1-(a/c)^2/2)/3 + (1 1 1)/2 U ( (1+(a/c)^2)/6 , (8-(a/c)^2)/12 , (8-(a/c)^2)/12 ) = (-1 1/2 1/2)*(1-(a/c)^2/2)/3 + (1 1 1)/2 K (1 0 -1)*(1+(a/c)^2/4)/3So, if you want to specify a typical circuit, the following might do the work (the representative points on lines of symmetry are indicated - there are sometimes more than one way to go from one point to another) : X-V-K-Sigma-Gamma-Lambda-T-Q-W-Y-L-sigma-Gamma-sigma-X . The suggestion is to sample this path with the following coordinates for the special points X, Gamma, T, L, Gamma, X :
kptbounds 1/2 0 -1/2 0 0 0 1/2 1/2 1/2 1 1/2 0 1 0 0 1 1/2 1/2
In order to find the lengths of segments (this information is useful to draw the band structure, with the correct relative scale between special points) one needs to know the a and c lattice parameters. Also, in what follows, we omit the 2*pi factor sometimes present in the definition of the reciprocal space vectors. The reciprocal vectors are (2/(3*a) 0 1/(3*c)) , -(1/(3*a) 1/(sqrt(3)*a) 1/(3*c), -(1/(3*a) -1/(sqrt(3)*a) 1/(3*c) ). The lengths of the above-mentioned segments can be computed as : l(X-Gamma)=2/(sqrt(3)*a)=1.155.../a , with l(K-Gamma)=(1+(a/c)^2/4)*4/(3*sqrt(3)*a); l(Gamma-T)=1/(2*c) ; l(T-L)=2/(sqrt(3)*a)=1.155.../a , with l(T-W)=(1-(a/c)^2/2)*4/(3*sqrt(3)*a); l(L-Gamma)=sqrt(4/(a^2)+1/(c^2))/3 l(Gamma-X)=sqrt(1/(a^2)+1/(c^2))*2/3
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kptrlatt
Mnemonics: K - PoinTs grid : Real space LATTice
Characteristic:
Variable type: integer array kptrlatt(3,3)
Default is No default.
This input variable is used only when kptopt is positive. It partially defines the k point grid. The other piece of information is contained in shiftk. kptrlatt cannot be used together with ngkpt.
The values kptrlatt(1:3,1), kptrlatt(1:3,2), kptrlatt(1:3,3) are the coordinates of three vectors in real space, expressed in the rprim coordinate system (reduced coordinates). They defines a super-lattice in real space. The k point lattice is the reciprocal of this super-lattice, eventually shifted (see shiftk).
If neither ngkpt nor kptrlatt
are defined, ABINIT will automatically generate a set
of k point grids, and select the best combination
of kptrlatt and shiftk
that allows to reach a sufficient value of kptrlen.
See this latter variable for a complete description of this
procedure.
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kptrlen
Mnemonics: K - PoinTs grid : Real space LENgth
Characteristic:
Variable type: real parameter
Default is 30.0d0 (WARNING : was 20 prior to v5.8).
This input variable is used only when kptopt is positive and non-zero.
Preliminary explanation :
The k point lattice defined by ngkpt
or kptrlatt is used to perform integrations
of periodic quantities in the Brillouin Zone, like
the density or the kinetic energy. One can relate the
error made by replacing the continuous integral by a sum
over k point lattice to the Fourier transform of the
periodic quantity. Erroneous contributions will appear
only for the vectors in real space that belong to the reciprocal
of the k point lattice, except the origin.
Moreover, the expected size of these
contributions usually decreases exponentially with the distance.
So, the length of the smallest of these real space vectors
is a measure of the accuracy of the k point grid.
When either ngkpt or kptrlatt is defined, kptrlen is not used as an input variable, but the length of the smallest vector will be placed in this variable, and echoed in the output file.
On the other hand, when neither ngkpt nor kptrlatt are defined, ABINIT will automatically generate a large set of possible k point grids, and select among this set, the grids that give a length of smallest vector LARGER than kptrlen, and among these grids, the one that, when used with kptopt=1, reduces to the smallest number of k points. Note that this procedure can be time-consuming. It is worth doing it once for a given unit cell and set of symmetries, but not use this procedure by default. The best is then to set prtkpt=1, in order to get a detailed analysis of the set of grids.
If some layer of vacuum is detected in the unit cell
(see the input variable vacuum), the
computation of kptrlen will ignore the
dimension related to the direction perpendicular
to the vacuum layer, and generate a bi-dimensional k point grid.
If the system is confined in a tube,
a one-dimensional k point grid will be generated.
For a cluster, this procedure will only generate the Gamma point.
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mixalch
Mnemonics: MIXing coefficients for ALCHemical potentials
Characteristic:
Variable type: integer array mixalch(npspalch,ntypalch)
Default is 0.d0 (will not accepted !)
Used for the generation of alchemical pseudoatoms, that is, when ntypalch is non-zero.
This array gives, for each type of alchemical pseudatom (there are ntypalch such pseudoatoms), the mixing coefficients of the basic npspalch pseudopotentials for alchemical use. For each type of alchemical pseudoatom, the sum of the mixing coefficients must equal 1.
The actual use of the mixing coefficients is defined by the input variable algalch.
Example 1. Suppose that we want to describe Ba(0.25) Sr(0.75) Ti O3.
The input variables related to the construction of the alchemical Ba(0.25) Sr(0.75)
potential will be :
npsp 4 ! 4 pseudopotentials should be read. znucl 8 40 56 38 ! The nuclear charges. Note that the two ! atoms whose pseudopotentials are to be mixed ! are mentioned at the end of the series. ntypat 3 ! There will be three types of atoms. ntypalch 1 ! One pseudoatom will be alchemical. ! Hence, there will be ntyppure=2 pure pseudoatoms, ! with znucl 8 (O) and 40 (Ti), corresponding to ! the two first pseudopotentials. Out of the ! four pseudopotentials, npspalch=2 are left ! for alchemical purposes, with znucl 56 (Ba) ! and 38 (Sr). mixalch 0.25 0.75 ! For that unique pseudoatom to be ! generated, here are the mixing coeeficients, ! to be used to combine the Ba and Sr pseudopotentials.
Example 2. More complicated, and illustrate some minor drawback of the
design of input variables.
Suppose that one wants to generate Al(0.25)Ga(0.75) As(0.10)Sb(0.90).
The input variables will be :
npsp 4 ! 4 pseudopotentials should be read znucl 13 31 33 51 ! The atomic numbers. All pseudopotentials ! will be used for some alchemical purpose ntypat 2 ! There will be two types of atoms. ntypalch 2 ! None of the atoms will be "pure". ! Hence, there will be npspalch=4 pseudopotentials ! to be used for alchemical purposes. mixalch 0.25 0.75 0.0 0.0 ! This array is a (4,2) array, arranged in the 0.0 0.0 0.1 0.9 ! usual Fortran order.Minor drawback : one should not forget to fill mixalch with the needed zero's, in this later case.
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natsph
Mnemonics: Number of ATomic SPHeres for the atom-projected density-of-states
Characteristic:
Variable type: integer parameter
Default is natom
This input variable is active only in the prtdos=3 case or if pawfatbnd=1 or 2.
It gives the number of atoms around which the sphere for atom-projected density-of-states will be built, in the prtdos=3 case. The indices of these atoms are given by iatsph. The radius of these spheres is given by ratsph.
If pawfatbnd=1 or 2, it gives the number of atoms around which atom-projected band structure will be built (the indices of these atoms are given by iatsph).
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nbdbuf
Mnemonics: Number of BanDs for the BUFfer
Characteristic:
Variable type: integer parameter
Default is 0. However, the default is changed to 2 in some cases, see later.
nbdbuf gives the number of bands, the highest in energy, that, among the nband bands, are to be considered as part of a buffer. This concept is useful in three situations: in non-self-consistent calculations, for the determination of the convergence tolerance ; for response functions of metals, to avoid instabilities, and also when finite electric fields or non-linear responses (with electric field perturbations) are considered. For the two first, the need of a buffer is a natural requirement of the problem, so that the default value is changed to 2 automatically, as explained in the following. The third case is only for implementation convenience.
In non-self-consistent GS calculations (iscf<0),
the highest levels might be
difficult to converge, if they are degenerate with another level,
that does not belong to the set of bands treated. Then, it might
take extremely long to reach tolwfr, although
the other bands are already extremely well-converged, and the energy
of the highest bands (whose residual are not yet good enough), is
also rather well converged.
In response to this problem, for non-zero nbdbuf, the
largest residual (residm), to be later compared with tolwfr,
will be computed only in the set of non-buffer bands (this modification
applies for non-self-consistent as well as self-consistent calculation,
for GS as well as RF calculations).
For a GS calculation, with iscf<0, supposing
nbdbuf is not initialized in the input file,
then ABINIT will overcome the default nbdbuf value,
and automatically set nbdbuf to 2.
In metallic RF calculations, in the conjugate gradient optimisation
of first-order wavefunctions, there is an instability situation
when the q wavevector of the perturbation brings the eigenenergy of the
highest treated band at some k point higher than the lowest
untreated eigenenergy at some k+q point.
If one accept a buffer of frozen states, this instability can be made to
disappear. Frozen states receive automatically a residual value of -0.1d0.
For a RF calculation, with 3<=occopt<=7,
supposing
nbdbuf is not initialized in the input file, then
ABINIT will overcome the default nbdbuf value,
and automatically set nbdbuf to 2. This value might be too low
in some cases.
Also, the number of active bands, in all cases, is imposed
to be at least 1, irrespective of the value of nbdbuf.
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nberry
Mnemonics: Number of BERRY phase computations
Characteristic:
Variable type: integer nberry
Default is 1
Used for non-zero values of berryopt.
Gives the number of Berry phase computations of polarisation, or finite-difference estimations of the derivative of wavefunctions with respect to the wavevector, each of which might be characterized by a different change of wavevector kberry.
When equal to 0, no Berry phase calculation of polarisation is performed. The maximal value of nberry is 20.
Note that the computation of the polarisation for a set of bands having different occupation numbers is meaningless (although in the case of spin-polarized calculations, the spin up bands might have an identical occupation number, that might differ from the identical occupation number of spin down bands). Although meaningless, ABINIT will perform such computation, if required by the user. The input variable bdberry governs the set of bands for which a Berry phase is computed.
The computation of the Berry phase is not yet implemented
for spinor wavefunctions (nspinor=2).
Moreover, it is not yet implemented in the parallel version of ABINIT.
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ndivk
Mnemonics: Number of DIVisions of K lines
Characteristic: NOT INTERNAL
Variable type: integer array ndivk(abs(kptopt))
Default is No default.
Gives the number of divisions of each of the segments of the band structure, whose path is determined by kptopt and kptbounds. This is only needed when kptopt is negative. In this case, the absolute value of kptopt is the number of such segments.
For example, suppose that the number of segment is just one (kptopt=-1), a value ndivk=4 will lead to the computation of points with relative coordinates 0.0, 0.25, 0.5, 0.75 and 1.0 , along the segment in consideration.
Now, suppose that there are two segments (kptopt=-2), with ndivk(1)=4 and ndivk(2)=2, the computation of the eigenvalues will be done at 7 points, 5 belonging to the first segment, with relative coordinates 0.0, 0.25, 0.5, 0.75 and 1.0, the last one being also the starting point of the next segment, for which two other points must be computed, with relative coordinates 0.5 and 1.0 .
It is easy to compute disconnected circuits (non-chained segments), by separating the circuits with the value ndivk=1 for the intermediate segment connecting the end of one circuit with the beginning of the next one (in which case no intermediate point is computed along this segment).
Alternatively it is possible to generate automatically the array ndivk
by just specifying the number of divisions for the smallest segment.
See the related input variable ndivsm.
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ndivsm
Mnemonics: Number of DIVisions for the SMallest segment
Characteristic: NOT INTERNAL
Variable type:integer
Default is No default.
Gives the number of divisions used to sample the smallest segment of the circuit employed during a band structure calculation (see related input variables kptopt and kptbounds). If ndivsm is given in the input file, there is no need to specify the number of divisions to be used for the other segments. Indeed ndivk is automatically calculated inside the code in order to generate a path where the number of divisions in each segment is proportial to the length of the segment itself. This option is activated only when kptopt is negative. In this case, the absolute value of kptopt is the number of such segments.
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ngfft
Mnemonics: Number of Grid points for Fast Fourier Transform
Characteristic:
Variable type: integer array ngfft(3)
Default is 0 0 0 (so, automatic selection of optimal values)
gives the size of fast Fourier transform (fft) grid in three dimensions. Each number must be composed of the factors 2, 3, and 5 to be consistent with the radices available in our fft. If no ngfft is provided or if ngfft is set to 0 0 0, the code will automatically provide an optimal set of ngfft values, based on acell, rprim and ecut. This is the recommended procedure, of course.
The total number of FFT points is the product:
ngfft(1)*ngfft(2)*ngfft(3)=nfft .
When ngfft is made smaller than recommended values, the code runs faster and the equations in effect are approximated by a low pass Fourier filter. The code reports to standard output (unit 06) a parameter "boxcut" which is the smallest ratio of the fft box side to the G vector basis sphere diameter. When boxcut is less than 2 the Fourier filter approximation is being used. When boxcut gets less than about 1.5 the approximation may be too severe for realistic results and should be tested against larger values of ngfft. When boxcut is larger than 2, ngfft could be reduced without loss of accuracy. In this case, the small variations that are observed are solely due to the xc quadrature, that may be handled with intxc=1 to even reduce this effect.
Internally, ngfft is an array of size 18. The present components are stored in ngfft(1:3), while
- ngfft(4:6) contains slightly different (larger) values, modified for efficiency of the FFT
- ngfft(7) is fftalg
- ngfft(8) is fftcache
- ngfft(9) is set to 0 if the parallelization of the FFT is not activated, while it is set to 1 if it is activated.
- ngfft(10) is the number of processors of the FFT group
- ngfft(11) is the index of the processor in the group of processors
- ngfft(12) is n2proc, the number of x-z planes, in reciprocal space, treated by the processor
- ngfft(13) is n3proc, the number of x-y planes, in real space, treated by the processor
- ngfft(14) is mpi_comm_fft, the handle on the MPI communicator in charge of the FFT parallelisation
- ngfft(15:18) are not yet used
The number of points stored by this processor in real space is n1*n2*n3proc, while in reciprocal space, it is n1*n2proc*n3.
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nline
Mnemonics: Number of LINE minimisations
Characteristic:
Variable type: integer parameter
Default is 4.
Gives maximum number of line minimizations allowed in preconditioned conjugate gradient minimization for each band. The Default, 4, is fine.
Special cases, with degeneracies or near-degeneracies of levels at the Fermi energy may require a larger value of nline (5 or 6 ?) Line minimizations will be stopped anyway when improvement gets small. With the input variable nnsclo, governs the convergence of the wavefunctions for fixed potential.
Note that nline=0 can be used to diagonalize the Hamiltonian matrix in the subspace spanned by the input wavefunctions.
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npsp
Mnemonics: Number of PSeudoPotentials
Characteristic: NO MULTI
Variable type: integer parameter
Default is ntypat
Usually, the number of pseudopotentials to be read is equal to the number of type of atoms. However, in the case an alchemical mixing of pseudopotential is to be used, often the number of pseudopotentials to be read will not equal the number of types of atoms.
Alchemical pseudopotentials will be present
when ntypalch is non-zero.
See ntypalch
to understand how
to use alchemical potentials in ABINIT.
The input variables
ntypalch,
algalch,mixalch)
are active, and generate alchemical potentials from the available
pseudopotentials. Also, the inner variables
ntyppure,npspalch)
becomes active. See these input variables, especially
mixalch, to understand how
to use alchemical potentials in ABINIT.
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npspalch
Mnemonics: Number of PSeudoPotentials that are "ALCHemical"
Characteristic: Inner
Variable type: integer parameter, non-negative
npspalch=npsp-ntyppure
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nqpt
Mnemonics: Number of Q - POINTs
Characteristic:
Variable type: integer parameter
Default is 0.
Determines whether one q point must be read (See the variables qpt and qptnrm).
Can be either 0 or 1.
If 1 and used in ground-state calculation, a global shift of all the k-points is applied, to give calculation at k+q. In this case, the output wavefunction will be appended by _WFQ instead of _WFK (see the section 4 of abinis_help) Also, if 1 and a RF calculation is done, defines the wavevector of the perturbation.
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nspden
Mnemonics: Number of SPin-DENsity components
Characteristic:
Variable type: integer parameter
The Default is the value of nsppol.
If nspden=1, no spin-magnetisation : the density matrix is diagonal, with same values spin-up and spin-down (compatible with nsppol=1 only, for both nspinor=1 or 2)
If nspden=2, scalar magnetization (the axis is arbitrarily fixed in the z direction) : the density matrix is diagonal, with different values for spin-up and spin-down (compatible with nspinor=1, either with nsppol=2 -general collinear magnetisation- or nsppol=1 -antiferromagnetism)
If nspden=4, vector magnetization : the density matrix is full, with allowed x, y and z magnetisation (useful only with nspinor=2 and nsppol=1, either because there is spin-orbit without time-reversal symmetry - and thus spontaneous magnetization, or with spin-orbit, if one allows for spontaneous non-collinear magnetism). Not yet available for response functions. Also note that, with nspden=4, time-reversal symmetry is not taken into account (at present ; this has to be checked) and thus kptopt has to be different from 1 or 2.
The default (nspden=nsppol)
does not suit the case of vector magnetization.
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| Complete list of input variables
nspinor
Mnemonics: Number of SPINORial components of the wavefunctions
Characteristic:
Variable type: integer parameter
The Default is 1 (2 if pawspnorb=1).
If nspinor=1, usual case : scalar wavefunction (compatible with (nsppol=1, nspden=1) as well as (nsppol=2, nspden=2) )
If nspinor=2, the wavefunction is a spinor (compatible with nsppol=1, with nspden=1 or 4, but not with nsppol=2)
When nspinor is 2, the values of istwfk
are automatically set to 1. Also, the number of bands, for each k-point,
should be even.
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| Complete list of input variables
ntypalch
Mnemonics: Number of TYPe of atoms that are "ALCHemical"
Characteristic:
Variable type: integer parameter
Default is 0
Used for the generation of alchemical pseudopotentials : when ntypalch is non-zero, alchemical mixing will be used.
Among the ntypat types of atoms, the last ntypalch will be "alchemical" pseudoatoms, while only the first ntyppure will be uniquely associated with a pseudopotential (the ntyppure first of these, actually). The ntypalch types of alchemical pseudoatoms are to be made from the remaining npspalch pseudopotentials.
In this case,
the input variables
algalch,mixalch
are active, and generate alchemical potentials from the available
pseudopotentials. See these input variables, especially
mixalch, to understand how
to use alchemical potentials in ABINIT.
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ntyppure
Mnemonics: Number of TYPe of atoms that are "PURe"
Characteristic: Inner
Variable type: integer parameter, non-negative
ntyppure=ntypat-ntypalch
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nwfshist
Mnemonics: Number of WaveFunctionS HISTory
Characteristic:
Variable type: integer parameter, non-negative
Default is 0
In the wavelet basis set, the ground state is found by direct minimisation. The algorithm used can be either the steepest descent or the DIIS (Direct Inversion of Iteration Space). When nwfshist = 0, the steepest descent is used (i.e. there is no history storage of the previous iterations). If nwfshist is strictly positive, a DIIS is used. A typical value is 6. Using a DIIS increases the memory required by the program since N previous wavefunctions are stored during the electronic minimisation.
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positron
Mnemonics: POSITRON calculation
Characteristic:
Variable type: integer
Default is 0
For positron=1 or 2, will perform the calculation of positron lifetime (and decay rate). In case of positron=1, one considers that the electrons are not perturbed by the presence of the positron. This is almost correct for a positron in a perfect bulk material. But this approximation fails when defects exist in the material. For example, the positron might be trapped by a vacancy. Then locally its density will be important and will influence the electrons density. In this case, one has to use positron=2. However, positron=2 is in development, and will not be described here.
In case positron=1, the calculation is done in two steps.
The first one is a normal GS calculation for the electrons, with positron=0, in a large cell (one or two atoms per unit cell is not enough, since the calculation has to be done subsequently at the Gamma point only, see next paragraph). The only specific thing to do is to set prtden and prtvha to 1 in the input file. This will create the associated files _DEN and _VHA which will used as input files for the GS calculation of the positron. An important restriction exist for the pseudopotentials of this step : no non-linear XC core correction is allowed (consult the documentation about pseudopotentials in the proper directory Infos/Psp_infos).
The second step is the GS calculation of the positron and subsequently its lifetime, with positron=1. One has to define also ixcpositron. A proper calculation must be done with only one band (nband=1) and only the gamma point in the BZ (kptopt=0, nkpt=1, and kpt= 0 0 0). One has also to use specific pseudopotentials for the positron calculation. They must be of the FHI type, and must contain at their end, the all-electrons core density generated with FHI98PP. They must have lmax=lloc=0 (check that this works for the electronic GS !! No ghost, etc ...) and pspxc=0 (no self-interaction terms must be taken into account for the positron). Otherwise, their are similar to a usual FHI pseudopotential.
References :
- J. Arponen and E. Pajanne, Ann. Phys. (N.Y.) 121, 343 (1979).
- E. Boronski and R.M. Nieminen, Phys. Rev. B 34, 3820 (1986).
- M.J. Puska, A.P. Seitsonen, and R.M. Nieminen, Phys. Rev. B 52, 10947 (1994).
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occ
Mnemonics: OCCupation numbers
Characteristic: EVOLVING
Variable type: real array occ(nband)
Default is 0's.
Gives occupation numbers for all bands in the problem. Needed if occopt==0 or occopt==2. Ignored otherwise. Also ignored when iscf=-2.
Typical band occupancy is either 2 or 0, but can be 1 for half-occupied band or other choices in special circumstances.
If occopt is not 2, then the occupancies must be the same for each k point.
If occopt=2, then the band occupancies must be provided explicitly for each band, EACH k POINT, and EACH SPIN-POLARIZATION, in an array which runs over all bands, k points, and spin-polarizations.
The order of entries in the array would correspond to all bands at the first k point (spin up), then all bands at the second k point (spin up), etc, then all k-points spin down.
The total number of array elements which must be provided is
( nband(1)+nband(2)+...+ nband(nkpt) ) * nsppol .
The occupation numbers evolve only for metallic occupations, that is, occopt=3 .
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optdriver
Mnemonics: OPTions for the DRIVER
Characteristic:
Variable type: integer parameter
The Default is optdriver=0
For each dataset, choose the task to be done, at the level of the "driver" routine.
The choice is among :
optdriver=0 : ground-state calculation (GS), routine "gstate"
optdriver=1 : response-function calculation (RF), routine "respfn"
optdriver=2 : susceptibility calculation (SUS), routine "suscep"
optdriver=3 : susceptibility and dielectric matrix calculation (SCR), routine "screening"
(see the input variables ecutwfn,
ecuteps,
ppmfrq,
getkss,
as well as nbandkss and nband)
optdriver=4 : self-energy calculation (SIG), routine "sigma"
optdriver=5 : non-linear response functions, using the 2n+1 theorem, routine "nonlinear"
If one of rfphon, rfelfd,
or rfstrs is non-zero, while optdriver
is not defined in the input file, ABINIT will set optdriver to 1
automatically. These input variables (rfphon,
rfelfd, and rfstrs) must be
zero if optdriver is not set to 1.
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| Complete list of input variables
optstress
Mnemonics: OPTion for the computation of STRess
Characteristic:
Variable type: integer
Default is 1
If set to 1, the computation of stresses is done, in the SCF case (under the conditions iscf > 0 , prtstm==0 , positron==0, and either nstep >0 , or usepaw==0 or irdwfk==1).
Otherwise, to save CPU time, if no optimization of the cell is required, one can skip the computation of stresses. The CPU time saving might be interesting for some PAW calculations.
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so_psp
Mnemonics: Spin-Orbit treatment for each PSeudoPotential
Characteristic:
Variable type: integer array so_psp(npsp)
Default is npsp*1
For each type of atom (each pseudopotential), specify the treatment of spin-orbit interaction (if nspinor==2).
If 0 : no spin-orbit interaction, even if nspinor=2
If 2 : treat spin-orbit in the HGH form (not allowed for all pseudopotentials)
If 3 : treat spin-orbit in the HFN form (not allowed for all pseudopotentials)
Also, so_psp=1 lead automatically to treatments 0, 2, or 3 according to the data contained in the pseudopotential file (0= there is no spin-orbit information in the psp file; 2= the spin-orbit information is of the HGH form; 3= the spin-orbit information is of the HFN form ) So, for typical usage, one will need only the values 0 or 1
Note that if nspinor==1, the spin-orbit cannot be treated anyhow, so the value of so_psp is irrelevant.
Prior to v5.4, the input variable so_typat (or pspso)
was used, in place of so_psp. Because the values 0 and 1 have been switched
between so_psp and so_typat, it was dangerous to continue to allow the use of so_typat.
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qpt
Mnemonics: Q PoinT
Characteristic:
Variable type: real array of 3 elements
Default is 0 0 0.
Define a q vector.
See qptnrm for extra normalization.
In ground-state calculation, if nqpt is 1, the vector qptn(1:3)= qpt(1:3)/qptnrm is added to each renormalized k point kpt(1:3)/kptnrm to generate the normalized, shifted, set of k-points kptns(1:3,1:nkpt).
In response-function calculations, qptn(1:3)= qpt(1:3)/qptnrm is the wavevector of the phonon-type calculation.
For insulators, there is no restriction on the q-points to be used for the perturbations. By contrast, for metals, for the time being, it is advised to take q points for which the k and k+q grids are the same (when the periodicity in reciprocal space is taken into account).
Tests remain to be done to see whether other q points might be allowed (perhaps with some modification of the code).
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prtdensph
Mnemonics: PRinT integral of DENsity inside atomic SPHeres
Characteristic:
Variable type: integer parameter
Default is 0 except when antiferro-magnetism is activated (nsppol=1, nspden=2).
When this flag is activated, values of integral(s) of total density inside sphere(s) around each atom are printed in output file (for each spin component). Spheres around atoms are defined by a radius given by ratsph keyword.
Note: integral of density inside a sphere around an atom can be used to determine a rough approximation of the local magnetic moment; this is particulary useful for antiferromagnetic systems.
The algorithm to compute this integral is particularly primitive : the points on the FFT grids, belonging to the interior of the sphere are determined, and the value of the functions on these points are summed, taking into account a fixed volume attributed to each point. In particular, the integral as a function of the radius will be a constant, except when a new point enters the sphere, in which case a sudden jump occurs. However, since the purpose of this output is to get a rough idea of the repartitjon of the density, this is not a real problem. If you are interested in a more accurate estimation of the density within a sphere, you should use the cut3d postprocessor.
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qptnrm
Mnemonics: Q PoinTs NoRMalization
Characteristic:
Variable type: real parameter
Default is 1.0
Provides re-normalization of qpt. Must be positive, non-zero. The actual q vector (renormalized) is qptn(1:3)= qpt(1:3)/qptnrm.
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ratsph
Mnemonics: Radii of the ATomic SPHere(s)
Characteristic:
Variable type: real array ratsph(ntypat)
Default is 2.0 Bohr for norm-conserving psps, PAW radius (found in PAW dataset file) for PAW
Relevant only when prtdos=3 or prtdensph=1.
When prtdos=3:
Provides the radius of the spheres around the natsph atoms of indices iatsph, in which the local DOS and its angular-momentum projections will be analysed. The choice of this radius is quite arbitrary. In a plane-wave basis set, there is no natural definition of an atomic sphere. However, it might be wise to use the following well-defined and physically motivated procedure (in version 4.2, this procedure is NOT implemented, unfortunately) : from the Bader analysis, one can define the radius of the sphere that contains the same charge as the Bader volume. This "Equivalent Bader charge atomic radius" might then be used to perform the present analysis. See the AIM (Bader) help file for more explanations. Another physically motivated choice would be to rely on another charge partitioning, like the Hirshfeld one (see the cut3d utility). The advantage of using charge partitioning schemes comes from the fact that the sum of atomic DOS, for all angular momenta and atoms, integrated on the energy range of the occupied states, gives back the total charge. If this is not an issue, one could rely on the half of the nearest-neighbour distances, or any scheme that allows to define an atomic radius. Note that the choice of this radius is however critical for the balance between the s, p and d components. Indeed, the integrated charge within a given radius, behave as a different power of the radius, for the different channels s, p, d. At the limit of very small radii, the s component dominates the charge contained in the sphere ...
When prtdensph=1:
Provides the radius of the spheres around (all) atoms in which the total charge density will be integrated.
In case of PAW, ratsph radius has to be greater or equal to PAW radius of considered atom type (which is read from the PAW dataset file; see rc_sph or r_paw).
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slabwsrad
Mnemonics: jellium SLAB Wigner-Seitz RADius
Characteristic: LENGTH
Variable type: real parameter
Default is 0.0d0.
Fix the bulk-mean positive charge density n_{bulk} of a jellium slab (if the latter is employed, e.g. jellslab ≠ 0). Often called "r_{s}" [see for example N. D. Lang and W. Kohn PRB 1, 4555 (1970)], slabwsrad is the radius of a sphere which has the same volume as the average volume per particle in a homogeneous electron gas with density n_{bulk}, so:
1/n_{bulk} = 4/3 Pi * slabwsrad^{3}For example, the bulk aluminum fcc lattice constant is a=4.0495 Angstroms (webelements.com), each cubic centered cell includes 4 Al atoms and each atom has 3 valence electrons, so the average volume per electron is a^{3}/12=37.34 Bohr^{3} which has to be equal to 4/3 Pi*r_{s}^{3}. Consequently Al has approximately r_{s}=2.07 Bohr, while for example magnesium has r_{s}=2.65 Bohr, sodium 3.99 Bohr.
By default, given in Bohr atomic units (1 Bohr=0.5291772108 Angstroms).
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slabzbeg
Mnemonics: jellium SLAB BEGinning edge along the Z direction
slabzend
Mnemonics: jellium SLAB ENDing edge along the Z direction
Characteristic:
Variable type: real parameter
Default is 0.0d0, 0.0d0.
Define the edges of the jellium slab (if used, so if jellslab ≠ 0)
along z, namely the slab starts at a point along z which is expressed in Bohr by slabzbeg
and it ends at a point expressed in Bohr by slabzend.
The z direction is parallel to the third crystal primitive lattice vector
which has to be orthogonal to the other ones,
so the length of the cell along z is rprimd(3,3).
In addition slabzbeg and slabzend have to be such that:
0 ≤ slabzbeg < slabzend ≤ rprimd(3,3)Together with slabwsrad they define the jellium positive charge density distribution n_{+}(x,y,z) in this way:
n_{+}(x,y,z) = n_{bulk} if slabzbeg ≤ z ≤ slabzend = 0 otherwise,so the positive charge density is invariant along the xy plane as well as the electrostatic potential generated by it.
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spinat
Mnemonics: SPIN for AToms
Characteristic:
Variable type: real array spinat(3,natom) or spinat(3,natrd) if the symmetriser is used
Default is 0.0d0.
Gives the initial electronic spin-magnetisation for each atom, in unit of h-bar/2.
Note that if nspden=2,
the z-component must be given
for each atom, in triplets (0 0 z-component).
For example, the electron of an hydrogen atom
can be spin up (0 0 1.0) or spin down (0 0 -1.0).
This value is only used to create
the first exchange and correlation potential,
and is not used anymore afterwards.
It is not checked against the initial occupation numbers
occ for each spin channel.
It is meant to give an easy way to break
the spin symmetry, and to allow
to find stable local spin fluctuations, for example :
antiferromagnetism, or the spontaneous spatial
spin separation of elongated H2 molecule.
In case of collinear antiferromagnetism (nsppol=1, nspinor=1, nspden=2), these symmetries are used to symmetrize the density.
In case of non-collinear magnetism (nsppol=1, nspinor=1, nspden=4), they are also used to symmetrize the density. In the latter case, this strongly constrains the magnetization (imposing its direction). If the user want to let all degrees of freedom of the magnetization evolve, it is then recommended to put nsym=1.
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stmbias
Mnemonics: Scanning Tunneling Microscopy BIAS voltage
Characteristic: ENERGY
Variable type: real parameter
Default is 0.00
Gives, in Hartree, the bias of the STM tip, with respect to the sample, in order to generate the STM density map.
Used with positive iscf, occopt=7 (metallic, gaussian), nstep=1 , and positive prtstm, this value is used to generate a charge density map from electrons close to the Fermi energy, in a (positive or negative) energy range. Positive stmbias will lead to the inclusion of occupied (valence) states only, while negative stmbias will lead to the inclusion of unoccupied (conduction) states only.
Can be specified in Ha (the default), Ry, eV or Kelvin, since stmbias has the 'ENERGY' characteristics. 0.001 Ha = 27.2113845 meV = 315.773 Kelvin . With occopt=7, one has also to specify an independent broadening tsmear.
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symafm
Mnemonics: SYMmetries, Anti-FerroMagnetic characteristics
Characteristic:
Variable type: integer array symafm(nsym)
Default is nsym*1.
In case the material is magnetic (well, this is only interesting in the case of antiferromagnetism, collinear or not), additional symmetries might appear, that change the sign of the magnetisation. They have been introduced by Shubnikov (1951). They can be used by ABINIT to decrease the CPU time, by using them to decrease the number of k-points.
symafm should be set to +1 for all the usual symmetry operations, that do not change the sign of the magnetisation, while it should be set to -1 for the magnetisation-changing symmetries.
If the symmetry operations are not specified by the user in the input file, that is, if nsym=0, then ABINIT will use the values of spinat to determine the content of symafm.
The symmetries found as "antiferro magnetic" (symafm=-1) are used to symmetrize density and magnetization in the following cases:
- antiferromagnetism (nsppol=1, nspinor=1, nspden=2)
- non-collinear magnetism (nsppol=1, nspinor=1, nspden=4)
In other cases they are not used.
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timopt
Mnemonics: TIMing OPTion
Characteristic: NO MULTI
Variable type: integer parameter
Default is 1 for sequential code, 0 for parallel code.
This input variable allows to modulate the use of the timing routines.
If 0 => as soon as possible, suppresses all calls to timing routines
If 1 => usual timing behaviour, with short analysis, appropriate
for sequential execution
If 2 => close to timopt=1, except that the analysis routine
does not time the timer, appropriate for parallel execution.
If 3 => close to timopt=1, except that the different parts of the lobpcg routine are timed in detail.
If -1 => a full analysis of timings is delivered
If -2 => a full analysis of timings is delivered,
except timing the timer
If -3 => a full analysis of timings is delivered, including the detailed timing of the different parts of the lobpcg routine.
(this takes time, and is discouraged for too small runs - the timing would take more time than the run !)
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tl_nprccg
Mnemonics: TaiL maximum Number of PReConditionner Conjugate Gradient iterations
Characteristic:
Variable type: integer parameter
Default is 30.
This variable is the same than wvl_nprccg but for the preconditionner iterations during the tail corrections (see tl_radius).
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tl_radius
Mnemonics: TaiL expansion RADIUS
Characteristic: LENGTH
Variable type: real parameter
Default is 0.0d0.
In the wavelet computation case, the linkage between the grid and the free boundary conditions can be smooth using an exponential decay. This means a correction on the energy at the end on each wavefunction optimisation run. If this parameter is set to zero, no tail computation is done. On the contrary, put it to a positive value makes the tail correction available. The value correspond to a length in atomic being the spacial expansion with the exponential decay around the grid.
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tphysel
Mnemonics: Temperature (PHYSical) of the ELectrons
Characteristic: ENERGY
Variable type: real parameter
Default is 0.00
Gives, in Hartree, the physical temperature of the system, in case occopt=4, 5, 6, or 7.
Can be specified in Ha (the default), Ry, eV or Kelvin, since ecut has the 'ENERGY' characteristics. 0.001 Ha = 27.2113845 meV = 315.773 Kelvin . One has to specify an independent broadening tsmear. The combination of the two parameters tphysel and tsmear is described in a paper by M. Verstraete and X. Gonze, Phys. Rev. B (2002). Note that the signification of the entropy is modified with respect to the usual entropy. The choice has been made to use tsmear as a prefactor of the entropy, to define the entropy contribution to the free energy.
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tsmear
Mnemonics: Temperature of SMEARing
Characteristic: ENERGY
Variable type: real parameter
Default is 0.04
Gives the broadening of occupation numbers occ, in the metallic cases (occopt=3, 4, 5, 6 and 7). Can be specified in Ha (the default), eV, Ry, or Kelvin, since tsmear has the 'ENERGY' characteristics. 0.001 Ha = 27.2113845 meV = 315.773 Kelvin
Default is 0.04 Ha. This should be OK for a free-electron metal like Al. For d-band metals, use 0.01 Ha.
Always check the convergence of the calculation with respect to this parameter, and simultaneously, with respect to the sampling of k-points (see nkpt)
If occopt=3, tsmear is the physical temperature, as the broadening is based on Fermi-Dirac statistics. However, if occopt=4, 5, 6, or 7, the broadening is not based on Fermi-Dirac statistics, and tsmear is only a convergence parameter. It is still possible to define a physical temperature, thanks to the input variable tphysel. See the paper by M. Verstraete and X. Gonze, Phys. Rev. B (2002).
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vacuum
Mnemonics: VACUUM identification
Characteristic: NOT INTERNAL
Variable type: integer array vacuum(3)
Default is No Default
Establishes the presence (if 1) or absence (if 0) of a vacuum layer, along the three possible directions normal to the primitive axes.
This information might be used to generate k-point grids,
if kptopt=0 and neither
ngkpt nor kptrlatt
are defined (see explanations with the input variable
prtkpt).
It will allow to select
a zero-, one-, two- or three-dimensional
grid of k points. The coordinate of the k points
along vacuum directions is automatically set to zero.
If vacuum is not defined, the input variable
vacwidth
will be used to determine automatically whether the
distance between atoms is sufficient to have the
presence or absence of vacuum.
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vacwidth
Mnemonics: VACuum WIDTH
Characteristic: LENGTH
Variable type: real parameter
Default is 10.0
Give a minimum "projected" distance between atoms to be found in order to declare that there is some vacuum present for each of the three directions. By default, given in Bohr atomic units (1 Bohr=0.5291772108 Angstroms), although Angstrom can be specified, if preferred, since vacwidth has the 'LENGTH' characteristics.
The precise requirement is that a slab of width vacwidth, delimited by two planes of constant reduced coordinates in the investigated direction, must be empty of atoms.
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wvl_crmult
Mnemonics: WaVeLet Coarse grid Radius MULTiplier
Characteristic:
Variable type: real parameter
Default is 6.0
This factor is used to defined the expansion of the coarse resolution grid in the case of wavelets (see usewvl). The grid is made of points inside spheres centered on atoms. The radius of these spheres are the product between this factor and the covalent radius of element (read from the pseudo-potential file).
This factor is responsible for the amount of used memory (see also wvl_hgrid).
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wvl_cpmult
Mnemonics: WaVeLet Coarse grid Projector radius MULTiplier
Characteristic:
Variable type: real parameter
Default is 10.0
This factor is used to defined the expansion of the coarse resolution grid for the description of the projectors in the case of wavelets (see usewvl).
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wvl_frmult
Mnemonics: WaVeLet Fine grid Radius MULTiplier
Characteristic:
Variable type: real parameter
Default is 10.0
This factor is used to defined the expansion of the fine resolution grid in the case of wavelets (see usewvl). This fine resolution grid has the same grid step than the coarse one (see wvl_crmult), but on each point, 8 coefficients are stored instead of one, increasing the precision of the calculation in this area. The grid is made of points inside spheres centered on atoms. The radius of these spheres are the product between this factor and a value read from the pseudo-potential file.
This factor is responsible for the amount of used memory (see also wvl_hgrid).
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wvl_fpmult
Mnemonics: WaVeLet Fine grid Projector radius MULTiplier
Characteristic:
Variable type: real parameter
Default is 10.0
This factor is used to defined the expansion of the fine resolution grid for the description of the projectors in the case of wavelets (see usewvl).
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wvl_nprccg
Mnemonics: WaVeLet maximum Number of PReConditionner Conjugate Gradient iterations
Characteristic:
Variable type: integer parameter
Default is 5
In the wavelet computation case, the wavefunctions are directly minimised using a real-space precondionner. This preconditonner has internally some conjugate gradient iterations. This value define a boundary for the number of conjugate gradient iterations on each wavefunction convergence step.
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xclevel
Mnemonics: eXchange Correlation functional level
Characteristic: INTERNAL
Variable type: integer parameter
Default is 0
Automatically determined from the value of ixc.
- 0 => No XC contribution.
- 1 => LDA functional.
- 2 => GGA functional.
- 3 => Functional for TDDFT.
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