Current version of USpp2Abinit :v2.4.0
Available
for Abinit
v5.4.3+
See this note for use with previous versions of
Abinit
To obtain PAW atomic data for Abinit we proceed as follows:
- We patch D. Vanderbilt's USPP package in order to
make it generate PAW atomic data in Abinit's format (in addition to
ultrasoft pseudopotentials).
- "Patched" USPP is directly useable to produce PAW
atomic data from normal USPP input files.
- USPP
ultrasoft pseudopotentials generator (version 7.3.6 or higher)
This code is written in Fortran 77 -
USpp2Abinit add-on tu USPP
This code is written in Fortran 90 - A Linux/Unix workstation with (at least) following tools:
Fortran 90 compiler with F77 libraries, sed stream editor, make utility.
If not, first take at look at the complete user's guide written for it.
- Download USPP package. You can find it here. Be sure to download version 7.3.6 or higher (including some modif. for Abinit).
- Extract USPP (in some /uspp-xyzdirectory)
- Download USpp2Abinit package.
You can find it here (fully compatible with ABINIT v6.1.0+; partly compatible with ABINIT v5.4.3+).
See this note for use of USpp2Abinit with versions 4.6.x-6.0.x of ABINIT.
Here USpp2Abinit for Abinit v4.3.x-v.4.5.x (buggy !, only for tests).
- Extract Uspp2Abinit into USPP directory (in /uspp-xyz/USpp2Abinit.vx.y.z directory).
Note that you also get a new /uspp-xyz/utils-uspp directory
- Go into /uspp-xyz/Uspp2Abinit.vx.y.z directory and edit Makefile file; modify it according to your machine specifications.
- Into /uspp-xyz/Uspp2Abinit.vx.y.z directory,
- Type: make
It compiles a patched version of USPP (with Abinit PAW add-ons) and creates runatom.x in /uspp-xyz/USpp2Abinit.vx.y.zdirectory - Type : make install
It installs "patched" runatom.x into /uspp-xyz/Bin directory
- Optional:Type : make clean
it cleans up /uspp-xyz/Uspp2Abinit.vx.y.z directory
or : make clean_all it cleans up /uspp-xyz/Uspp2Abinit.vx.y.z and /uspp-xyz/Source directories
- At this stage you get a patched version of USPP package; you can use it like original USPP.
3. Generating a PAW "pseudopotential file" for Abinit:
- Simply use USPP as if you wanted to generate an ultrasoft pseudopotential !
Go into /uspp-xyz/Work
directory; browse down sub-directories, selecting chemical specie and
density functional (LDA, GGA).
Type make clean; make
If you encounter some error during
execution, look for an error message in the ??_ae.out or ??_ps.out file; if the error
message is not explicit enough, look at Doc/TUTORIAL (most of the problems are referenced inside).
- And you get a X.abinit.paw file (X=generic name) directly useable by Abinit !
- Additional options:
- A file named
uspp2abinit.dat
can be added in the working directory
to pass arguments to the USpp2Abinit converter.
Here, an example of this file, with details on the different keywords.
- Note: if you want to use Abinit prior version 5.2 (especially v4.6.x), you HAVE TO use the COMPAT46 keyword in uspp2abinit.dat file.
- Note for experienced users:
If you want to use "Real Space Optimisation" to improve the behaviour of non-local projectors, you have to use specific keywords in uspp2abinit.datfile.
The scheme is governed by 3 parameters: Gmax (=2*Ecut**2), Gamma and Wl ; the user has to give these parameters in uspp2abinit.dat file.
The efficiency of Real Space Optimization strongly depends on the non-local projectors produced by USPP (it can be sometimes unuseful); only experienced users should use it...
- You
can as a first step use input files (*.adat files) distributed by D.
Vanderbilt on his web site.
But we recommend to make additional tests before using those input files. PAW formalism is a bit different from US pseudopotentials one and can induce a different behaviour of atomic data. - The choice
of a density
functionalis limited
by functionals included in USPP package
and in Abinit.
To be used a density functional model must be incorporated into both packages.
Only four functionals are programmed in USPP and Abinit together: Ceperley-Adler (LDA), Wigner (LDA), Hedin-Lundqvist (LDA), Perdew-Burke-Ernzerhof 96 (GGA) - In order to check the
validity of atomic data produced by USPP, a simple test is the
comparison of the logarithmic
derivatives of wave functions (exact ones compared to pseudo
ones).
A simple PYTHON script pltlogd is provided within USpp2Abinit package in /uspp-xyz/utils-uspp directory to plot these derivatives. It uses the ??.logd file produced by USPP.
Just type: pltlogd file.logd l, where l is an angular momentum (0, 1, 2, or 3).
D. Vanderbilt, Phys. Rev. B 41 (Rapid Communications), 7892 (1990)
[2] Implementation
of Ultra-Soft Pseudopotentials in Ab-initio Molecular Dynamics,
K. Laasonen, R. Car, C.
Lee, D. Vasnderbilt, Phys. Rev. B 43 (Rapid Communications), 6796 (1991)
G. Kresse, D. Joubert, Phys. Rev. B 59, 1758 (1999)
[4] Real-space implementation
of nonlocal pseudopotentials for 1st-principle total-energy
calculations,
R.D. King-Smith, M.C. Payne, J.S. Lin, Phys. Rev. B
44, 13063 (1991)
[5]
Implementation of the projector augmented-wave method in the ABINIT
code: Application to the study of iron under pressure,
M. Torrent,
F. Jollet, F. Bottin, G. Zerah and X. Gonze, Comput. Mater. Sci.
42, 337 (2008)
- In case of problem or questions contact the authors.
Marc Torrent
Francois Jollet
Département de Physique Théorique et Appliquée
CEA, DAM, DIF
F-91127 Arpajon
France
Last modification : may 11th 2010

